Shelter measurements

Quick summary

Figure 1: Combination of 1D and 2D models in BASEMENT (source: VAW).

Figure 2: Graphical user interface of BASEMENT (source: VAW) (click to enlarge).

Figure 3: Visualization of BASEMENT results with QGIS plugin Crayfish (source: VAW) (click to enlarge).

Developed by: A. G. FINSTAD

Date:

Type: Method

Suitable for the following [[::Category:Measures|measures]]:

Introduction

The technique was developed by Finstad to estimate the shelter availability for juvenile salmon (Finstad et al. 2007a). In this stage of their life cycle, the salmon seeks shelter in the free spaces of the upper layers of the river bed sediment (Figure 1). The existence and size of such openings to be used as shelter is measured with the described technique. It is relatively easy to be carried out in the field. The method is based on the idea to mimic the small fish by using a plastic tube which has the approximate diameter of such a fish.

For salmon Finstad used tubes with five different diameters (5, 10, 13, 16, 22 mm). As a result of their experiments Forseth et al. (2014) suggest the use of a 13mm tube to conduct the tests in an area of about 0.25m2. The tube is marked according to the three different shelter categories at lengths of 2, 5 and 10 cm to be able to detect certain possible hiding depths. Within the fixed framed area one is aiming to find every hole or opening where one can stick the tube into. The length of the tube (defined by the three rings) which is not visible any more, defines the potential hiding depth (Figure 2).

The post-processing of the data is quite simple and described in the following section.

In FIThydro this technique shall be applied also to other fish species than the salmon. Therefore we use in addition tubes with diameters of 5 mm and 8 mm. These results can then be linked to the D5 and D10 grain diameter of the sediment (Szabo-Meszaros et al 2016).

The method was developed in and for Norwegian rivers with large grain sizes. It is currently (also in FIThydro) under investigation if, when using it in rivers with a smaller D50, i.e. smaller grain sizes, this relation still applies or another relation becomes relevant.

Application

For the measurement the following material is needed:  one tube with a diameter of 13 mm and marks (rings) at 2, 5 and 10 cm  one frame (metal or wood) to define the size of the area to be counted on  something to take notes The hiding depth thresholds are defined as 2, 5 and 10 cm and often named as class S1 (2 cm – 5 cm), class S2 (5 cm – 10 cm) and class S3 (> 10 cm). It is recommended that the same person is carrying out the counting, to minimize the human based systematic error as much as possible. When all values are collected in the field, the counted numbers for the different classes / hiding depth per spot are weighted using the following empirical formula described in Forseth et al (2014): S1 + S2 x 2 + S3 x 3 Based on the following matrix the shelter availability can be defined: Table 1: shelter availability depending on the number of shelter available Shelter Class Low Moderate High Values for weighted shelter < 5 5 – 10 > 10

Other information

In addition to the use on regular Windows and Linux workstations, the upcoming version 3.0 of BASEMENT (March 2019) is designed to run on graphical processing units (GPUs) and distributed memory computer clusters allowing engineers to tackle problems with very large computational domains or long simulation time.

Relevant literature

• Vetsch D., Siviglia A., Caponi F., Ehrbar D., Gerke E., Kammerer S., Koch A., Peter S., Vanzo D., Vonwiller L., Facchini M., Gerber M., Volz C., Farshi D., Mueller R., Rousselot P., Veprek R., Faeh R. 2018. System Manuals of BASEMENT, Version 2.8. Laboratory of Hydraulics, Glaciology and Hydrology (VAW). ETH Zurich. Available from http://www.basement.ethz.ch.

Contact information

Website (download, tutorials, etc.): http://www.basement.ethz.ch

Email: basement@ethz.ch